miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|55912197|gb|CO852390.1|CO852390 CGTAATGCCACATGGTACGTCGCCTCTTTATTGCCAGTATCAACGAATCTTTAGACTAACCTCCTTGGTTGTTGCACTTC
TTTCGGCTATAGATACTCCCTGTGGTCGAAGTTCACTTCACCCGGCAAAGAAATTTGGCTGGACGTGACGCCAAAGTACA
ATAGTTAATGGACGCGGCAATATAAATGAGTTCCAATGGCAAAAGTGTCGGGAAACATGGGAGCTGATGAACTGTTAAAG
GGAGCTGGAATATTATCGCGTCCAGCGGAAGAATTTGAGAATGATGCATCATTGGAAGCGATGTGGGCTGTTAAGGCCTA
TGAACATGCAGAAGTATATTTCAATATTTTATGTTCAGTAGATCCAAAGCTTTTGAGACTGACACCCCATGACGACATGA
TTTACAAAATTTTCCGTGAAGAATTTCCAGATATGAAAGTCGATATACTGGTAGAAGATGAATTAAAAAGTGCACAAGGA
AAGGAGAAATGGCGTCCATTTTGTGAGCGGTTCAAGAATGTTGTGGAAGACTACAGTTTTGGGACACTCCTACGACTTGA
TCACAAAGGAGAGTACAATGAGCAGAACAGCATT




Most similar to sp|Q9D0B6|CX026_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9D0B6|CX026_MOUSE UPF0368 protein Cxorf26 homolog OS=Mus
           musculus PE=2 SV=1
          Length = 198

 Score =  137 bits (346), Expect = 4e-32
 Identities = 64/122 (52%), Positives = 85/122 (69%)
 Frame = +1

Query: 229 ELLKGAGILSRPAEEFENDASLEAMWAVKAYEHAEVYFNILCSVDPKLLRLTPHDDMIYK 408
           E L  A  LS P E + ND  +E  WA++A +HAEVY+ ++ SVDP+ L+LT  DD IY 
Sbjct: 14  EALSIAHALSHPPESYGNDPDIEMAWAIRAMQHAEVYYKLISSVDPQFLKLTKVDDQIYS 73

Query: 409 IFREEFPDMKVDILVEDELKSAQGKEKWRPFCERFKNVVEDYSFGTLLRLDHKGEYNEQN 588
            FRE F  ++VD+L  +ELKS   KEKWRPFC +F+ +VEDY++GTLLRLD    Y E+N
Sbjct: 74  EFREIFETLRVDVLDPEELKSESAKEKWRPFCLKFEGIVEDYNYGTLLRLDCSQGYTEEN 133

Query: 589 SI 594
           +I
Sbjct: 134 TI 135